MGYG000308650

Taxonomy

Pullilachnospira stercoravium Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Pullilachnospira > Pullilachnospira stercoravium

Cluster representative

MGYG000311831

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000311831 on MGnify
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Annotations

MGYG000308650’s cluster representative genome MGYG000311831 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000311831 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308650 Copy API Endpoint

MGYG000308650’s cluster representative (MGYG000311831) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000311831’s sequence. Because MGYG000308650 has been clustered with MGYG000311831 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308650.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000311831

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA7697626	SAMEA112905069	Probiotic
0.21	SAMEA10105030	SAMEA112905361	Prebiotic
0.21	SAMEA7571775	SAMEA112904797	Control
0.21	SAMEA9449915	SAMEA112905199	Probiotic
0.21	SAMEA10105019	SAMEA112905196	Control
0.21	SAMEA10104929	SAMEA112905175	Prebiotic
0.21	SAMEA9449840	SAMEA112905215	Probiotic
0.21	SAMEA9449885	SAMEA112905121	Control
0.21	SAMEA14095992	SAMEA112904848	Probiotic
0.21	SAMEA9449954	SAMEA112905379	Probiotic