MGYG000308559

Taxonomy

Klebsiella pneumoniae Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella > Klebsiella pneumoniae

Cluster representative

MGYG000308299

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000308299 on MGnify
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Annotations

MGYG000308559’s cluster representative genome MGYG000308299 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000308299 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308559 Copy API Endpoint

MGYG000308559’s cluster representative (MGYG000308299) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000308299’s sequence. Because MGYG000308559 has been clustered with MGYG000308299 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308559.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000308299

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Containment	Sample accession	Animal accession	Treatment
0.23	SAMEA9449922	SAMEA112904890	Control
0.22	SAMEA10455494	SAMEA112905043	Control
0.22	SAMEA7571847	SAMEA112905358	Prebiotic
0.21	SAMEA7571826	SAMEA112905123	Probiotic