MGYG000308495

Taxonomy

Barnesiella viscericola Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Barnesiellaceae > Barnesiella > Barnesiella viscericola

Cluster representative

MGYG000311447

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000311447 on MGnify
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Annotations

MGYG000308495’s cluster representative genome MGYG000311447 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000311447 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308495 Copy API Endpoint

MGYG000308495’s cluster representative (MGYG000311447) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000311447’s sequence. Because MGYG000308495 has been clustered with MGYG000311447 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308495.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000311447

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA9449952	SAMEA112905334	Probiotic
1.00	SAMEA7571872	SAMEA112905318	Prebiotic
1.00	SAMEA7025274	SAMEA112905263	Probiotic
1.00	SAMEA9449946	SAMEA112905020	Prebiotic
1.00	SAMEA7025271	SAMEA112905138	Probiotic
1.00	SAMEA7571844	SAMEA112904814	Control
1.00	SAMEA7025289	SAMEA112905253	Control
1.00	SAMEA10105017	SAMEA112904790	Probiotic
1.00	SAMEA10454449	SAMEA112905153	Prebiotic
1.00	SAMEA7025277	SAMEA112905229	Control