MGYG000308407

Taxonomy

Barnesiella merdigallinarum Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Barnesiellaceae > Barnesiella > Barnesiella merdigallinarum

Cluster representative

MGYG000315481

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315481 on MGnify
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Annotations

MGYG000308407’s cluster representative genome MGYG000315481 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315481 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308407 Copy API Endpoint

MGYG000308407’s cluster representative (MGYG000315481) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315481’s sequence. Because MGYG000308407 has been clustered with MGYG000315481 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308407.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315481

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
0.23	SAMEA7571767	SAMEA112905143	Control
0.23	SAMEA10105072	SAMEA112905070	Prebiotic
0.23	SAMEA7025240	SAMEA112904911	Probiotic
0.22	SAMEA7571781	SAMEA112904970	Control
0.22	SAMEA10105073	SAMEA112905137	Prebiotic
0.21	SAMEA7571792	SAMEA112905107	Control
0.21	SAMEA7025236	SAMEA112905113	Probiotic