MGYG000308395

Taxonomy

Fimimorpha faecalis Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Fimimorpha > Fimimorpha faecalis

Cluster representative

MGYG000310152

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000310152 on MGnify
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Annotations

MGYG000308395’s cluster representative genome MGYG000310152 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000310152 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308395 Copy API Endpoint

MGYG000308395’s cluster representative (MGYG000310152) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000310152’s sequence. Because MGYG000308395 has been clustered with MGYG000310152 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308395.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000310152

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025283	SAMEA112904873	Control
1.00	SAMEA10105037	SAMEA112904745	Probiotic
1.00	SAMEA7025289	SAMEA112905253	Control
1.00	SAMEA10105022	SAMEA112905200	Probiotic
1.00	SAMEA7571832	SAMEA112905299	Control
1.00	SAMEA10105071	SAMEA112904878	Prebiotic
0.99	SAMEA7025275	SAMEA112905332	Probiotic
0.98	SAMEA10145597	SAMEA112904983	Control
0.98	SAMEA7697616	SAMEA112905295	Probiotic
0.96	SAMEA7571872	SAMEA112905318	Prebiotic