HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904959: a HoloFood chicken host

Data available for SAMEA112904959


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112904959 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904959, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 20.64 g
Average Daily Feed intake: Day 00 - 35 95.12 g
Average Daily Feed intake: Day 07 - 21 78.11 g
Average Daily Feed intake: Day 21 - 35 154.98 g
Average Daily Gain: Day 00 - 07 19.36 g
Average Daily Gain: Day 00 - 35 61.61 g
Average Daily Gain: Day 07 - 21 56.32 g
Average Daily Gain: Day 21 - 35 88.02 g
Average European Performance Efficiency Factor: Day 00 - 07 181.53 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.395 None
Average Feed to Conversion Ratio: Day 07 - 21 1.387 g/g
Average Mortality without culleds: Day 07 - 21 2.5 %
Average body weight at day 00 45.75 g
Average body weight at day 07 181.25 g
Average body weight at day 21 969.7 g
Average body weight at day 35 2202 g
European Performance Efficiency Factor: Day 00 - 35 369.08 None
European Performance Efficiency Factor: Day 07 - 21 395.91 None
European Performance Efficiency Factor: Day 21 - 35 469.63 None
FCR (not corrected): Day 00 - 07 1.066 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.589 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.859 None
Feed to Conversion Ratio: Day 00 - 07 1.066 g/g
Feed to Conversion Ratio: Day 00 - 35 1.544 g/g
Feed to Conversion Ratio: Day 21 - 35 1.761 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=93.94 P1=6.06 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=55.56 P1=25.93 P2=14.81 P3=3.70 P4=0.00 %
Litter at Day 07 5.8 pH
Litter at Day 21 7.86 pH
Litter at Day 35 8.27 pH
Mean Abdominal fat Yield 1.57 %
Mean Abdominal fat weight 40.97 g
Mean Breast Yield 20.32 %
Mean Breast weight 519.02 g
Mean CRP at Day 07 2.2296 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1944.1 g
Mean Carcass Yield 76.65 %
Mean HPT at Day 07 0.88776 ng/ml
Mean HPT at Day 21 0.84446 ng/ml
Mean HPT at Day 35 0.69347 ng/ml
Mean LPS at Day 07 6.7536 ng/L
Mean LPS at Day 21 4.6572 ng/L
Mean LPS at Day 35 5.7167 ng/L
Mean Legs Yield 19.66 %
Mean Legs weight 498.93 g
Mean TBARS 0.07 mg MDA/kg
Mean carcass body weight 2532.5 g
Mean feather cortisol at Day 07 7.9567 pg/mg
Mean feather cortisol at Day 21 14.538 pg/mg
Mean feather cortisol at Day 35 19.165 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 7.5 %
Mortality without culleds: Day 21 - 35 6.06 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 7.5 %
Mortality: Day 07 - 21 2.5 %
Mortality: Day 21 - 35 6.06 %
Pen code CB17 None

Sample metadata

Marker Measurement Units
Animal code CB17.05 None
Breed Cobb None
C-Reactive protein 2.7 pg/ml
Chicken body weight 169.7 g
Feather cortisol 9.2 pg/mg
Haptoglobin 0 ng/ml
Lipopolysaccharide 51 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None