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Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

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Viral sequence ID Parent contig Type Taxonomy View
ERZ2916534.24007-NODE-24007-length-3022-cov-4.199865|viral_sequence ERZ2916534.24007-NODE-24007-length-3022-cov-4.199865 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.24047-NODE-24047-length-3019-cov-2.439946|viral_sequence ERZ2916534.24047-NODE-24047-length-3019-cov-2.439946 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.24343-NODE-24343-length-2990-cov-5.509029|viral_sequence ERZ2916534.24343-NODE-24343-length-2990-cov-5.509029 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.25-NODE-25-length-231673-cov-23.172767|prophage-3292:73092 ERZ2916534.25-NODE-25-length-231673-cov-23.172767 prophage View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916534.25267-NODE-25267-length-2911-cov-5.017507|viral_sequence ERZ2916534.25267-NODE-25267-length-2911-cov-5.017507 viral_sequence Tunavirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.25757-NODE-25757-length-2871-cov-6.398438|viral_sequence ERZ2916534.25757-NODE-25757-length-2871-cov-6.398438 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916534.261-NODE-261-length-78505-cov-10.496571|prophage-1:31362 ERZ2916534.261-NODE-261-length-78505-cov-10.496571 prophage View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916534.26246-NODE-26246-length-2833-cov-2.952484|viral_sequence ERZ2916534.26246-NODE-26246-length-2833-cov-2.952484 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.2634-NODE-2634-length-16900-cov-5.336836|prophage-30:11000 ERZ2916534.2634-NODE-2634-length-16900-cov-5.336836 prophage View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2916534.27333-NODE-27333-length-2750-cov-5.042301|viral_sequence ERZ2916534.27333-NODE-27333-length-2750-cov-5.042301 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue