HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907457: CC04.16D4a_Inflammatory markers

Sample data for SAMEA112907457, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905117
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907457 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907457, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -1.637 logfold expression-copies number
IFNγ -2.546 logfold expression-copies number
IL-1 -3.245 logfold expression-copies number
IL-10 -5.298 logfold expression-copies number
IL-12 -3.469 logfold expression-copies number
IL-17 -3.251 logfold expression-copies number
IL-18 -2.331 logfold expression-copies number
IL-2 -4.156 logfold expression-copies number
IL-4 -3.685 logfold expression-copies number
IL-6 -5.43 logfold expression-copies number
IL-8 -2.351 logfold expression-copies number
MUC-2 -0.616 logfold expression-copies number
TGFβ -1.043 logfold expression-copies number
TNF-α -3.58 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CC04.16D4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907457