HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907438: CC11.11D4a_Inflammatory markers

Sample data for SAMEA112907438, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112904814
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907438 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907438, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.213 logfold expression-copies number
IFNγ -2.863 logfold expression-copies number
IL-1 -2.489 logfold expression-copies number
IL-10 -6.388 logfold expression-copies number
IL-12 -4.303 logfold expression-copies number
IL-17 -4.283 logfold expression-copies number
IL-18 -2.9 logfold expression-copies number
IL-2 -4.966 logfold expression-copies number
IL-4 -3.434 logfold expression-copies number
IL-6 -5.565 logfold expression-copies number
IL-8 -2.384 logfold expression-copies number
MUC-2 -1.861 logfold expression-copies number
TGFβ -1.101 logfold expression-copies number
TNF-α -3.016 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CC11.11D4a None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907438