HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907419: CC19.05D4a_Inflammatory markers

Sample data for SAMEA112907419, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905278
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907419 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907419, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.314 logfold expression-copies number
IFNγ -3.218 logfold expression-copies number
IL-1 -3.459 logfold expression-copies number
IL-10 -7.444 logfold expression-copies number
IL-12 -4.656 logfold expression-copies number
IL-17 -3.735 logfold expression-copies number
IL-18 -2.937 logfold expression-copies number
IL-2 -5.06 logfold expression-copies number
IL-4 -4.464 logfold expression-copies number
IL-6 -4.889 logfold expression-copies number
IL-8 -3.078 logfold expression-copies number
MUC-2 -0.677 logfold expression-copies number
TGFβ -1.649 logfold expression-copies number
TNF-α -3.163 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CC19.05D4a None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907419