HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907417: CC16.05D4a_Inflammatory markers

Sample data for SAMEA112907417, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112904897
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907417 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907417, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.262 logfold expression-copies number
IFNγ -3.489 logfold expression-copies number
IL-1 -3.706 logfold expression-copies number
IL-10 -6.266 logfold expression-copies number
IL-12 -5.078 logfold expression-copies number
IL-17 -3.633 logfold expression-copies number
IL-18 -3.026 logfold expression-copies number
IL-2 -5.474 logfold expression-copies number
IL-4 -4.484 logfold expression-copies number
IL-6 -5.11 logfold expression-copies number
IL-8 -3.04 logfold expression-copies number
MUC-2 -0.706 logfold expression-copies number
TGFβ -1.634 logfold expression-copies number
TNF-α -3.233 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CC16.05D4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907417