HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907266: CA19.11D4a_Inflammatory markers

Sample data for SAMEA112907266, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905034
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907266 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907266, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.282 logfold expression-copies number
IFNγ -2.613 logfold expression-copies number
IL-1 -2.498 logfold expression-copies number
IL-10 -6.329 logfold expression-copies number
IL-12 -4.564 logfold expression-copies number
IL-17 -3.486 logfold expression-copies number
IL-18 -2.836 logfold expression-copies number
IL-2 -5.39 logfold expression-copies number
IL-4 -3.687 logfold expression-copies number
IL-6 -5.815 logfold expression-copies number
IL-8 -2.246 logfold expression-copies number
MUC-2 -0.842 logfold expression-copies number
TGFβ -1.204 logfold expression-copies number
TNF-α -2.902 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA19.11D4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907266