HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907216: CA04.09D4a_Inflammatory markers

Sample data for SAMEA112907216, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905177
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907216 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907216, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -0.7817 logfold expression-copies number
IFNγ -1.0527 logfold expression-copies number
IL-1 -1.7297 logfold expression-copies number
IL-10 -4.7373 logfold expression-copies number
IL-12 -2.9758 logfold expression-copies number
IL-17 -2.6569 logfold expression-copies number
IL-18 -2.4426 logfold expression-copies number
IL-2 -2.7106 logfold expression-copies number
IL-4 -3.2224 logfold expression-copies number
IL-6 -4.1491 logfold expression-copies number
IL-8 -2.3802 logfold expression-copies number
MUC-2 -0.2158 logfold expression-copies number
TGFβ 0.2727 logfold expression-copies number
TNF-α -1.8943 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA04.09D4a None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907216