HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907211: CA24.05D4a_Inflammatory markers

Sample data for SAMEA112907211, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905378
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907211 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907211, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.273 logfold expression-copies number
IFNγ -2.389 logfold expression-copies number
IL-1 -3.009 logfold expression-copies number
IL-10 -4.449 logfold expression-copies number
IL-12 -4.264 logfold expression-copies number
IL-17 -3.591 logfold expression-copies number
IL-18 -2.95 logfold expression-copies number
IL-2 -4.694 logfold expression-copies number
IL-4 -4.5 logfold expression-copies number
IL-6 -5.16 logfold expression-copies number
IL-8 -2.349 logfold expression-copies number
MUC-2 -0.42 logfold expression-copies number
TGFβ -1.165 logfold expression-copies number
TNF-α -3.197 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA24.05D4a None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907211