HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907194: CA10.06D4a_Inflammatory markers

Sample data for SAMEA112907194, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905331
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907194 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907194, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -0.8528 logfold expression-copies number
IFNγ -1.1193 logfold expression-copies number
IL-1 -2.0105 logfold expression-copies number
IL-10 -4.4842 logfold expression-copies number
IL-12 -2.8591 logfold expression-copies number
IL-17 -2.4157 logfold expression-copies number
IL-18 -2.3226 logfold expression-copies number
IL-2 -2.5271 logfold expression-copies number
IL-4 -3.52 logfold expression-copies number
IL-6 -2.9427 logfold expression-copies number
IL-8 -2.0938 logfold expression-copies number
MUC-2 0.3629 logfold expression-copies number
TGFβ 0.2877 logfold expression-copies number
TNF-α -2.0166 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA10.06D4a None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907194