HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907188: CA05.06D4a_Inflammatory markers

Sample data for SAMEA112907188, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905192
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907188 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907188, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -0.9412 logfold expression-copies number
IFNγ -1.4792 logfold expression-copies number
IL-1 -2.1521 logfold expression-copies number
IL-10 -4.6852 logfold expression-copies number
IL-12 -3.3474 logfold expression-copies number
IL-17 -2.2345 logfold expression-copies number
IL-18 -2.7775 logfold expression-copies number
IL-2 -2.742 logfold expression-copies number
IL-4 -3.4362 logfold expression-copies number
IL-6 -3.6641 logfold expression-copies number
IL-8 -2.6955 logfold expression-copies number
MUC-2 0.3938 logfold expression-copies number
TGFβ -0.0981 logfold expression-copies number
TNF-α -1.9862 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA05.06D4a None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907188