HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907131: CC02.16A4a_Inflammatory markers

Sample data for SAMEA112907131, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905216
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907131 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907131, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.14 logfold expression-copies number
IFNγ -3.364 logfold expression-copies number
IL-1 -2.725 logfold expression-copies number
IL-10 -5.634 logfold expression-copies number
IL-12 -3.702 logfold expression-copies number
IL-17 -3.398 logfold expression-copies number
IL-18 -2.972 logfold expression-copies number
IL-2 -5.887 logfold expression-copies number
IL-4 -3.971 logfold expression-copies number
IL-6 -5.607 logfold expression-copies number
IL-8 -3.133 logfold expression-copies number
MUC-2 0.266 logfold expression-copies number
TGFβ -1.084 logfold expression-copies number
TNF-α -3.584 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CC02.16A4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907131