HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907128: CC17.13A4a_Inflammatory markers

Sample data for SAMEA112907128, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905283
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907128 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907128, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.127 logfold expression-copies number
IFNγ -3.375 logfold expression-copies number
IL-1 -2.817 logfold expression-copies number
IL-10 -5.654 logfold expression-copies number
IL-12 -3.708 logfold expression-copies number
IL-17 -3.725 logfold expression-copies number
IL-18 -2.976 logfold expression-copies number
IL-2 -5.089 logfold expression-copies number
IL-4 -4.074 logfold expression-copies number
IL-6 -5.465 logfold expression-copies number
IL-8 -3.386 logfold expression-copies number
MUC-2 0.142 logfold expression-copies number
TGFβ -1.415 logfold expression-copies number
TNF-α -3.375 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CC17.13A4a None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907128