HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907087: CC09.04A4a_Inflammatory markers

Sample data for SAMEA112907087, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905099
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907087 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907087, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.026 logfold expression-copies number
IFNγ -2.849 logfold expression-copies number
IL-1 -2.766 logfold expression-copies number
IL-10 -5.418 logfold expression-copies number
IL-12 -3.629 logfold expression-copies number
IL-17 -4.097 logfold expression-copies number
IL-18 -2.73 logfold expression-copies number
IL-2 -5.338 logfold expression-copies number
IL-4 -4.195 logfold expression-copies number
IL-6 -5.62 logfold expression-copies number
IL-8 -3.289 logfold expression-copies number
MUC-2 0.037 logfold expression-copies number
TGFβ -1.268 logfold expression-copies number
TNF-α -3.031 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CC09.04A4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907087