HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907083: CC05.04A4a_Inflammatory markers

Sample data for SAMEA112907083, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112904846
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907083 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907083, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.095 logfold expression-copies number
IFNγ -2.753 logfold expression-copies number
IL-1 -2.918 logfold expression-copies number
IL-10 -5.448 logfold expression-copies number
IL-12 -3.516 logfold expression-copies number
IL-17 -3.891 logfold expression-copies number
IL-18 -2.975 logfold expression-copies number
IL-2 -5.48 logfold expression-copies number
IL-4 -3.884 logfold expression-copies number
IL-6 -5.756 logfold expression-copies number
IL-8 -3.554 logfold expression-copies number
MUC-2 0.142 logfold expression-copies number
TGFβ -1.356 logfold expression-copies number
TNF-α -3.773 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CC05.04A4a None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907083