HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112906994: CA16.18A4a_Inflammatory markers

Sample data for SAMEA112906994, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112904809
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112906994 Copy API Endpoint
Sample data

Metadata for sample SAMEA112906994, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.0616 logfold expression-copies number
IFNγ -2.7565 logfold expression-copies number
IL-1 -3.3332 logfold expression-copies number
IL-10 -5.0158 logfold expression-copies number
IL-12 -4.213 logfold expression-copies number
IL-17 -4.5876 logfold expression-copies number
IL-18 -2.8562 logfold expression-copies number
IL-2 -4.3943 logfold expression-copies number
IL-4 -3.6876 logfold expression-copies number
IL-6 -5.8476 logfold expression-copies number
IL-8 -3.0453 logfold expression-copies number
MUC-2 0.3394 logfold expression-copies number
TGFβ -0.5794 logfold expression-copies number
TNF-α -2.8835 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA16.18A4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906994