HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112906916: CA20.08A4a_Inflammatory markers

Sample data for SAMEA112906916, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905086
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112906916 Copy API Endpoint
Sample data

Metadata for sample SAMEA112906916, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.7146 logfold expression-copies number
IFNγ -2.131 logfold expression-copies number
IL-1 -1.9189 logfold expression-copies number
IL-10 -3.8424 logfold expression-copies number
IL-12 -2.7074 logfold expression-copies number
IL-18 -2.9416 logfold expression-copies number
IL-2 -4.4002 logfold expression-copies number
IL-4 -3.3743 logfold expression-copies number
IL-6 -4.0946 logfold expression-copies number
IL-8 -2.1459 logfold expression-copies number
MUC-2 0.5262 logfold expression-copies number
TGFβ -0.7993 logfold expression-copies number
TNF-α -2.7587 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA20.08A4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906916