HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112906883: CA19.06A4a_Inflammatory markers

Sample data for SAMEA112906883, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905313
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112906883 Copy API Endpoint
Sample data

Metadata for sample SAMEA112906883, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.9477 logfold expression-copies number
IFNγ -2.7848 logfold expression-copies number
IL-1 -1.9171 logfold expression-copies number
IL-10 -3.6282 logfold expression-copies number
IL-12 -2.5918 logfold expression-copies number
IL-17 -2.8722 logfold expression-copies number
IL-18 -2.6085 logfold expression-copies number
IL-2 -4.1565 logfold expression-copies number
IL-4 -3.407 logfold expression-copies number
IL-6 -4.0512 logfold expression-copies number
IL-8 -1.7161 logfold expression-copies number
MUC-2 0.5428 logfold expression-copies number
TGFβ -0.8242 logfold expression-copies number
TNF-α -2.9212 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA19.06A4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906883