HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112906865: CA05.06A4a_Inflammatory markers

Sample data for SAMEA112906865, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905192
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112906865 Copy API Endpoint
Sample data

Metadata for sample SAMEA112906865, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -3.0785 logfold expression-copies number
IFNγ -2.9644 logfold expression-copies number
IL-1 -1.7935 logfold expression-copies number
IL-10 -3.8291 logfold expression-copies number
IL-12 -2.524 logfold expression-copies number
IL-17 -2.7521 logfold expression-copies number
IL-18 -3.0121 logfold expression-copies number
IL-2 -4.5435 logfold expression-copies number
IL-4 -3.8294 logfold expression-copies number
IL-6 -4.1441 logfold expression-copies number
IL-8 -2.1683 logfold expression-copies number
MUC-2 0.4065 logfold expression-copies number
TGFβ -1.1808 logfold expression-copies number
TNF-α -3.15 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA05.06A4a None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906865