HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112906833: CA06.02A4a_Inflammatory markers

Sample data for SAMEA112906833, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905193
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112906833 Copy API Endpoint
Sample data

Metadata for sample SAMEA112906833, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.626 logfold expression-copies number
IFNγ -2.588 logfold expression-copies number
IL-1 -3.659 logfold expression-copies number
IL-10 -6.088 logfold expression-copies number
IL-12 -4.32 logfold expression-copies number
IL-17 -4.732 logfold expression-copies number
IL-18 -3.074 logfold expression-copies number
IL-2 -5.414 logfold expression-copies number
IL-4 -4.496 logfold expression-copies number
IL-6 -5.716 logfold expression-copies number
IL-8 -3.636 logfold expression-copies number
MUC-2 -0.062 logfold expression-copies number
TGFβ -0.963 logfold expression-copies number
TNF-α -2.795 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA06.02A4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906833