HoloFood Data Portal
Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112906574, a HoloFood metabolomic-targeted chicken sample
Metadata for sample SAMEA112906574, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Cadaverin | 0.096 | umol/g digesta |
| Gesamtamine (Total biogenic amines) | 2.657 | umol/g digesta |
| Histamin | 0.044 | umol/g digesta |
| Putrescin | 0.089 | umol/g digesta |
| Spermidin | 1.838 | umol/g digesta |
| Spermin | 0.022 | umol/g digesta |
| Tyramin | 0.568 | umol/g digesta |
| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acetic acid | 80.381 | umol/g digesta |
| Acetic:totalFA ratio | 0.639 | None |
| Ammonium | 14.86 | umol/g digesta |
| D-Lactate | 0.336 | umol/g digesta |
| L-Lactate | 0.153 | umol/g digesta |
| L:D lactic ratio | 1.302 | None |
| Propionic acid | 11.838 | umol/g digesta |
| Propionic:totalFA ratio | 0.094 | None |
| Total SCFAs | 125.78 | umol/g digesta |
| Total branch chain fatty acids | 2.221 | umol/g digesta |
| Total lactate | 0.489 | umol/g digesta |
| i-Butyric acid | 1.223 | umol/g digesta |
| i-Valeric acid | 0.997 | umol/g digesta |
| iButyric:totalFA ratio | 0.01 | None |
| iValeria:totalFA ratio | 0.008 | None |
| n-Butyric acid | 29.316 | umol/g digesta |
| n-Valeric acid | 2.027 | umol/g digesta |
| nButyric:totalFA ratio | 0.233 | None |
| nValeric:totalFA ratio | 0.016 | None |
| Marker | Measurement | Units |
|---|---|---|
| Body site | caecum content | None |
| Experiment | tm | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CB03.14F3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CC | None |
| Treatment name | Control | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CB | None |
| Trial description | Trial 2 | None |
| Trial end | 2019-05-19 | None |
| Trial start | 2019-04-21 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906574
