HoloFood Data Portal
Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112906113, a HoloFood metabolomic-targeted chicken sample
Metadata for sample SAMEA112906113, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Cadaverin | 0.005 | umol/g digesta |
| Gesamtamine (Total biogenic amines) | 0.025 | umol/g digesta |
| Histamin | 0 | umol/g digesta |
| Putrescin | 0.005 | umol/g digesta |
| Spermidin | 0.01 | umol/g digesta |
| Spermin | 0.005 | umol/g digesta |
| Tyramin | 0 | umol/g digesta |
| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acetic acid | 3.766 | umol/g digesta |
| Acetic:totalFA ratio | 0.92 | None |
| Ammonium | 1.95 | umol/g digesta |
| D-Lactate | 0.55 | umol/g digesta |
| L-Lactate | 5.39 | umol/g digesta |
| L:D lactic ratio | 9.8 | None |
| Propionic acid | 0.104 | umol/g digesta |
| Propionic:totalFA ratio | 0.025 | None |
| Total SCFAs | 4.117 | umol/g digesta |
| Total branch chain fatty acids | 0.217 | umol/g digesta |
| Total lactate | 5.94 | umol/g digesta |
| i-Butyric acid | 0.181 | umol/g digesta |
| i-Valeric acid | 0.035 | umol/g digesta |
| iButyric:totalFA ratio | 0.044 | None |
| iValeria:totalFA ratio | 0.009 | None |
| n-Butyric acid | 0 | umol/g digesta |
| n-Valeric acid | 0.031 | umol/g digesta |
| nButyric:totalFA ratio | 0 | None |
| nValeric:totalFA ratio | 0.007 | None |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum content | None |
| Experiment | tm | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CB08.16C3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CB | None |
| Trial description | Trial 2 | None |
| Trial end | 2019-05-19 | None |
| Trial start | 2019-04-21 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906113
