HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905961: CA05.11C3a_TM

Sample data for SAMEA112905961, a HoloFood metabolomic-targeted chicken sample


Sample details
Animal
Chicken SAMEA112905190
Sample type
Metabolomic / chemical data icon metabolomic-targeted
API endpoint
/api/samples/SAMEA112905961 Copy API Endpoint
Sample data

Metadata for sample SAMEA112905961, stored in BioSamples and ENA.

 Download all as TSV

Biogenic Amines metadata

Marker Measurement Units
Cadaverin 0.005 umol/g digesta
Gesamtamine (Total biogenic amines) 0.424 umol/g digesta
Histamin 0 umol/g digesta
Putrescin 0.019 umol/g digesta
Spermidin 0.033 umol/g digesta
Spermin 0.014 umol/g digesta
Tyramin 0.353 umol/g digesta

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Fatty Acids metadata

Marker Measurement Units
Acetic acid 1.573 umol/g digesta
Acetic:totalFA ratio 0.86 None
Ammonium 2.62 umol/g digesta
D-Lactate 2.7 umol/g digesta
L-Lactate 21.04 umol/g digesta
L:D lactic ratio 7.793 None
Propionic acid 0.087 umol/g digesta
Propionic:totalFA ratio 0.047 None
Total SCFAs 1.837 umol/g digesta
Total branch chain fatty acids 0.121 umol/g digesta
Total lactate 23.74 umol/g digesta
i-Butyric acid 0.112 umol/g digesta
i-Valeric acid 0.009 umol/g digesta
iButyric:totalFA ratio 0.061 None
iValeria:totalFA ratio 0.005 None
n-Butyric acid 0.019 umol/g digesta
n-Valeric acid 0.037 umol/g digesta
nButyric:totalFA ratio 0.01 None
nValeric:totalFA ratio 0.02 None

Sample metadata

Marker Measurement Units
Body site ileum content None
Experiment tm None
Organism Chicken None
Project HoloFood None
Sample code CA05.11C3a None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905961