HoloFood Data Portal
Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905926, a HoloFood metabolomic-targeted chicken sample
Metadata for sample SAMEA112905926, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Gesamtamine (Total biogenic amines) | 0.24 | umol/g digesta |
| Histamin | 0.012 | umol/g digesta |
| Putrescin | 0.023 | umol/g digesta |
| Spermidin | 0.076 | umol/g digesta |
| Spermin | 0.023 | umol/g digesta |
| Tyramin | 0.029 | umol/g digesta |
| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acetic acid | 1.404 | umol/g digesta |
| Acetic:totalFA ratio | 0.9 | None |
| Ammonium | 2.75 | umol/g digesta |
| D-Lactate | 2.84 | umol/g digesta |
| L-Lactate | 25.7 | umol/g digesta |
| L:D lactic ratio | 9.049 | None |
| Propionic acid | 0.035 | umol/g digesta |
| Propionic:totalFA ratio | 0.023 | None |
| Total SCFAs | 1.568 | umol/g digesta |
| Total branch chain fatty acids | 0.095 | umol/g digesta |
| Total lactate | 28.54 | umol/g digesta |
| i-Butyric acid | 0.088 | umol/g digesta |
| i-Valeric acid | 0.007 | umol/g digesta |
| iButyric:totalFA ratio | 0.056 | None |
| iValeria:totalFA ratio | 0.004 | None |
| n-Butyric acid | 0.018 | umol/g digesta |
| n-Valeric acid | 0.015 | umol/g digesta |
| nButyric:totalFA ratio | 0.011 | None |
| nValeric:totalFA ratio | 0.01 | None |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum content | None |
| Experiment | tm | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA03.07C3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905926
