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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905646, a HoloFood histological chicken sample
Metadata for sample SAMEA112905646, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 3.3 | per 100um |
| Acidic goblet cell number | 21.94 | None |
| CD3VillusBase | 22.41 | per 1000um squared |
| CD3VillusBaseEP | 21.69 | per 1000um squared |
| CD3VillusBaseLP | 23.96 | per 1000um squared |
| CD3VillusTip | 17.3 | per 1000um squared |
| CD3VillusTipEP | 15.72 | per 1000um squared |
| CD3VillusTipLP | 21.49 | per 1000um squared |
| CD3crypt | 41.88 | per 1000um squared |
| CD3cryptEP | 58.28 | per 1000um squared |
| CD3cryptLP | 25.48 | per 1000um squared |
| Crypt depth | 188.05 | um |
| Epithelial area | 118.07 | per 1000um squared |
| Mixed goblet cell density | 16.1 | per 100um |
| Mixed goblet cell number | 107.03 | None |
| Total goblet cell density | 19.4 | per 100um |
| Total goblet cell number | 128.97 | None |
| Villus height | 664.8 | um |
| Villus height: crypt depth ratio | 3.54 | um/um |
| Villus width | 177.6 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CC19.17A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CC | None |
| Treatment name | Control | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CC | None |
| Trial description | Trial 3 | None |
| Trial end | 2019-07-14 | None |
| Trial start | 2019-06-09 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905646
