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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905630, a HoloFood histological chicken sample
Metadata for sample SAMEA112905630, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 3.3 | per 100um |
| Acidic goblet cell number | 20.13 | None |
| CD3VillusBase | 21.88 | per 1000um squared |
| CD3VillusBaseEP | 20.86 | per 1000um squared |
| CD3VillusBaseLP | 24.41 | per 1000um squared |
| CD3VillusTip | 8.33 | per 1000um squared |
| CD3VillusTipEP | 6.9 | per 1000um squared |
| CD3VillusTipLP | 13.88 | per 1000um squared |
| CD3crypt | 39.15 | per 1000um squared |
| CD3cryptEP | 61.62 | per 1000um squared |
| CD3cryptLP | 16.68 | per 1000um squared |
| Crypt depth | 166.91 | um |
| Epithelial area | 124.04 | per 1000um squared |
| Mixed goblet cell density | 19.7 | per 100um |
| Mixed goblet cell number | 120.18 | None |
| Total goblet cell density | 23 | per 100um |
| Total goblet cell number | 140.31 | None |
| Villus height | 610.1 | um |
| Villus height: crypt depth ratio | 3.66 | um/um |
| Villus width | 203.33 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CC17.13A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CC | None |
| Treatment name | Control | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CC | None |
| Trial description | Trial 3 | None |
| Trial end | 2019-07-14 | None |
| Trial start | 2019-06-09 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905630
