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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905629, a HoloFood histological chicken sample
Metadata for sample SAMEA112905629, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 1.67 | per 100um |
| Acidic goblet cell number | 10.39 | None |
| CD3VillusBase | 22.14 | per 1000um squared |
| CD3VillusBaseEP | 20.03 | per 1000um squared |
| CD3VillusBaseLP | 26.14 | per 1000um squared |
| CD3VillusTip | 20.92 | per 1000um squared |
| CD3VillusTipEP | 15.72 | per 1000um squared |
| CD3VillusTipLP | 36.05 | per 1000um squared |
| CD3cryptEP | 48.58 | per 1000um squared |
| Crypt depth | 241.6 | um |
| Epithelial area | 126.94 | per 1000um squared |
| Mixed goblet cell density | 18 | per 100um |
| Mixed goblet cell number | 112.17 | None |
| Total goblet cell density | 19.67 | per 100um |
| Total goblet cell number | 122.55 | None |
| Villus height | 623.1 | um |
| Villus height: crypt depth ratio | 2.58 | um/um |
| Villus width | 203.72 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CC16.14A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CC | None |
| Trial description | Trial 3 | None |
| Trial end | 2019-07-14 | None |
| Trial start | 2019-06-09 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905629
