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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905613, a HoloFood histological chicken sample
Metadata for sample SAMEA112905613, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 1.5 | per 100um |
| Acidic goblet cell number | 12.19 | None |
| CD3VillusBase | 51.51 | per 1000um squared |
| CD3VillusBaseEP | 53.04 | per 1000um squared |
| CD3VillusBaseLP | 49.8 | per 1000um squared |
| CD3VillusTip | 27.9 | per 1000um squared |
| CD3VillusTipEP | 22.72 | per 1000um squared |
| CD3VillusTipLP | 50.75 | per 1000um squared |
| CD3crypt | 16.89 | per 1000um squared |
| CD3cryptEP | 23.46 | per 1000um squared |
| CD3cryptLP | 10.32 | per 1000um squared |
| Crypt depth | 162.7 | um |
| Epithelial area | 127.95 | per 1000um squared |
| Mixed goblet cell density | 25.6 | per 100um |
| Mixed goblet cell number | 208.1 | None |
| Total goblet cell density | 27.1 | per 100um |
| Total goblet cell number | 220.3 | None |
| Villus height | 812.9 | um |
| Villus height: crypt depth ratio | 5 | um/um |
| Villus width | 157.4 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CC08.12A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CC | None |
| Treatment name | Control | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CC | None |
| Trial description | Trial 3 | None |
| Trial end | 2019-07-14 | None |
| Trial start | 2019-06-09 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905613
