HoloFood Data Portal
Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905600, a HoloFood histological chicken sample
Metadata for sample SAMEA112905600, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 3.25 | per 100um |
| Acidic goblet cell number | 18.65 | None |
| CD3VillusTip | 37.32 | per 1000um squared |
| CD3VillusTipEP | 25.06 | per 1000um squared |
| CD3crypt | 9.56 | per 1000um squared |
| CD3cryptEP | 10.03 | per 1000um squared |
| CD3cryptLP | 9.08 | per 1000um squared |
| Crypt depth | 136.43 | um |
| Epithelial area | 133.49 | per 1000um squared |
| Mixed goblet cell density | 27.75 | per 100um |
| Mixed goblet cell number | 159.22 | None |
| Total goblet cell density | 31 | per 100um |
| Total goblet cell number | 177.86 | None |
| Villus height | 565.9 | um |
| Villus height: crypt depth ratio | 4.15 | um/um |
| Villus width | 235.89 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CC22.06A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CC | None |
| Treatment name | Control | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CC | None |
| Trial description | Trial 3 | None |
| Trial end | 2019-07-14 | None |
| Trial start | 2019-06-09 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905600
