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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905599, a HoloFood histological chicken sample
Metadata for sample SAMEA112905599, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 5.5 | per 100um |
| Acidic goblet cell number | 33.12 | None |
| CD3VillusBase | 26.91 | per 1000um squared |
| CD3VillusBaseEP | 20.65 | per 1000um squared |
| CD3VillusBaseLP | 40.81 | per 1000um squared |
| CD3VillusTip | 12.58 | per 1000um squared |
| CD3VillusTipEP | 8.12 | per 1000um squared |
| CD3VillusTipLP | 35.08 | per 1000um squared |
| CD3cryptEP | 26.96 | per 1000um squared |
| Crypt depth | 133.09 | um |
| Epithelial area | 65.31 | per 1000um squared |
| Mixed goblet cell density | 14.7 | per 100um |
| Mixed goblet cell number | 88.52 | None |
| Total goblet cell density | 20.2 | per 100um |
| Total goblet cell number | 121.64 | None |
| Villus height | 642.1 | um |
| Villus height: crypt depth ratio | 4.82 | um/um |
| Villus width | 101.72 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CC21.05A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CE | None |
| Treatment name | Prebiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CC | None |
| Trial description | Trial 3 | None |
| Trial end | 2019-07-14 | None |
| Trial start | 2019-06-09 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905599
