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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905593, a HoloFood histological chicken sample
Metadata for sample SAMEA112905593, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 8.9 | per 100um |
| Acidic goblet cell number | 50.08 | None |
| CD3VillusBase | 25.05 | per 1000um squared |
| CD3VillusBaseEP | 23.07 | per 1000um squared |
| CD3VillusBaseLP | 33.98 | per 1000um squared |
| CD3VillusTip | 14.62 | per 1000um squared |
| CD3VillusTipEP | 10.3 | per 1000um squared |
| CD3VillusTipLP | 23.23 | per 1000um squared |
| CD3crypt | 26.55 | per 1000um squared |
| CD3cryptEP | 33.24 | per 1000um squared |
| CD3cryptLP | 19.87 | per 1000um squared |
| Crypt depth | 121.02 | um |
| Epithelial area | 81.76 | per 1000um squared |
| Mixed goblet cell density | 18.5 | per 100um |
| Mixed goblet cell number | 104.1 | None |
| Total goblet cell density | 27.4 | per 100um |
| Total goblet cell number | 154.18 | None |
| Villus height | 569.2 | um |
| Villus height: crypt depth ratio | 4.7 | um/um |
| Villus width | 143.65 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CC14.05A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CC | None |
| Trial description | Trial 3 | None |
| Trial end | 2019-07-14 | None |
| Trial start | 2019-06-09 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905593
