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SAMEA112905550: CB21.11A3a_Histology

Sample data for SAMEA112905550, a HoloFood histological chicken sample


Sample details
Animal
Chicken SAMEA112905286
Sample type
Histology data icon histological
API endpoint
/api/samples/SAMEA112905550 Copy API Endpoint
Sample data

Metadata for sample SAMEA112905550, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Histology metadata

Marker Measurement Units
Acidic goblet cell density 0 per 100um
Acidic goblet cell number 0 None
CD3VillusBase 46.24 per 1000um squared
CD3VillusBaseEP 44.83 per 1000um squared
CD3VillusBaseLP 49.49 per 1000um squared
CD3VillusTip 45.92 per 1000um squared
CD3VillusTipEP 41.24 per 1000um squared
CD3VillusTipLP 60.31 per 1000um squared
CD3crypt 10.61 per 1000um squared
CD3cryptEP 10.93 per 1000um squared
CD3cryptLP 10.28 per 1000um squared
Crypt depth 123.22 um
Epithelial area 80.67 per 1000um squared
Mixed goblet cell density 19.5 per 100um
Mixed goblet cell number 103.72 None
Total goblet cell density 19.5 per 100um
Total goblet cell number 103.72 None
Villus height 531.9 um
Villus height: crypt depth ratio 4.32 um/um
Villus width 151.67 um

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment histology None
Organism Chicken None
Project HoloFood None
Sample code CB21.11A3a None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905550