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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905549, a HoloFood histological chicken sample
Metadata for sample SAMEA112905549, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 2.6 | per 100um |
| Acidic goblet cell number | 13.37 | None |
| CD3VillusBase | 30.44 | per 1000um squared |
| CD3VillusBaseEP | 26.45 | per 1000um squared |
| CD3VillusBaseLP | 38.04 | per 1000um squared |
| CD3VillusTip | 31.58 | per 1000um squared |
| CD3VillusTipEP | 24.03 | per 1000um squared |
| CD3VillusTipLP | 54.51 | per 1000um squared |
| CD3crypt | 11.86 | per 1000um squared |
| CD3cryptEP | 15.02 | per 1000um squared |
| CD3cryptLP | 8.7 | per 1000um squared |
| Crypt depth | 174 | um |
| Epithelial area | 52.61 | per 1000um squared |
| Mixed goblet cell density | 14.5 | per 100um |
| Mixed goblet cell number | 74.57 | None |
| Total goblet cell density | 17.1 | per 100um |
| Total goblet cell number | 87.95 | None |
| Villus height | 514.3 | um |
| Villus height: crypt depth ratio | 2.96 | um/um |
| Villus width | 102.3 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CB19.12A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CB | None |
| Trial description | Trial 2 | None |
| Trial end | 2019-05-19 | None |
| Trial start | 2019-04-21 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905549
