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SAMEA112905537: CB11.08A3a_Histology

Sample data for SAMEA112905537, a HoloFood histological chicken sample


Sample details
Animal
Chicken SAMEA112905097
Sample type
Histology data icon histological
API endpoint
/api/samples/SAMEA112905537 Copy API Endpoint
Sample data

Metadata for sample SAMEA112905537, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Histology metadata

Marker Measurement Units
Acidic goblet cell density 1.7 per 100um
Acidic goblet cell number 11.15 None
CD3VillusBase 34.43 per 1000um squared
CD3VillusBaseEP 32.5 per 1000um squared
CD3VillusBaseLP 38.52 per 1000um squared
CD3VillusTip 47.42 per 1000um squared
CD3VillusTipEP 43.8 per 1000um squared
CD3VillusTipLP 60.55 per 1000um squared
CD3crypt 16.74 per 1000um squared
CD3cryptEP 17.72 per 1000um squared
CD3cryptLP 15.76 per 1000um squared
Crypt depth 140.1 um
Epithelial area 70.92 per 1000um squared
Mixed goblet cell density 14.3 per 100um
Mixed goblet cell number 93.82 None
Total goblet cell density 16 per 100um
Total goblet cell number 104.98 None
Villus height 656.1 um
Villus height: crypt depth ratio 4.68 um/um
Villus width 108.1 um

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment histology None
Organism Chicken None
Project HoloFood None
Sample code CB11.08A3a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905537