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SAMEA112905536: CB10.09A3a_Histology

Sample data for SAMEA112905536, a HoloFood histological chicken sample


Sample details
Animal
Chicken SAMEA112905010
Sample type
Histology data icon histological
API endpoint
/api/samples/SAMEA112905536 Copy API Endpoint
Sample data

Metadata for sample SAMEA112905536, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Histology metadata

Marker Measurement Units
Acidic goblet cell density 0.7 per 100um
Acidic goblet cell number 4.42 None
CD3VillusBase 43.79 per 1000um squared
CD3VillusBaseEP 41.2 per 1000um squared
CD3VillusBaseLP 49.92 per 1000um squared
CD3VillusTip 27.67 per 1000um squared
CD3VillusTipEP 21.77 per 1000um squared
CD3VillusTipLP 55.51 per 1000um squared
CD3crypt 17.64 per 1000um squared
CD3cryptEP 19.5 per 1000um squared
CD3cryptLP 15.78 per 1000um squared
Crypt depth 122.5 um
Epithelial area 67.56 per 1000um squared
Mixed goblet cell density 20.5 per 100um
Mixed goblet cell number 129.56 None
Total goblet cell density 21.2 per 100um
Total goblet cell number 133.98 None
Villus height 632 um
Villus height: crypt depth ratio 5.16 um/um
Villus width 106.9 um

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment histology None
Organism Chicken None
Project HoloFood None
Sample code CB10.09A3a None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905536