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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905532, a HoloFood histological chicken sample
Metadata for sample SAMEA112905532, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 1.6 | per 100um |
| Acidic goblet cell number | 10.56 | None |
| CD3VillusBase | 58.55 | per 1000um squared |
| CD3VillusBaseEP | 50.32 | per 1000um squared |
| CD3VillusBaseLP | 74.22 | per 1000um squared |
| CD3VillusTip | 55.16 | per 1000um squared |
| CD3VillusTipEP | 47.39 | per 1000um squared |
| CD3VillusTipLP | 74.93 | per 1000um squared |
| CD3crypt | 9.79 | per 1000um squared |
| CD3cryptEP | 13.25 | per 1000um squared |
| CD3cryptLP | 6.33 | per 1000um squared |
| Crypt depth | 132.6 | um |
| Epithelial area | 82.09 | per 1000um squared |
| Mixed goblet cell density | 16.3 | per 100um |
| Mixed goblet cell number | 107.56 | None |
| Total goblet cell density | 17.9 | per 100um |
| Total goblet cell number | 118.12 | None |
| Villus height | 659.9 | um |
| Villus height: crypt depth ratio | 4.98 | um/um |
| Villus width | 124.4 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CB04.07A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CE | None |
| Treatment name | Prebiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CB | None |
| Trial description | Trial 2 | None |
| Trial end | 2019-05-19 | None |
| Trial start | 2019-04-21 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905532
