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SAMEA112905530: CB02.09A3a_Histology

Sample data for SAMEA112905530, a HoloFood histological chicken sample


Sample details
Animal
Chicken SAMEA112904836
Sample type
Histology data icon histological
API endpoint
/api/samples/SAMEA112905530 Copy API Endpoint
Sample data

Metadata for sample SAMEA112905530, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Histology metadata

Marker Measurement Units
Acidic goblet cell density 7.2 per 100um
Acidic goblet cell number 27.55 None
CD3VillusBase 50.88 per 1000um squared
CD3VillusBaseEP 40.54 per 1000um squared
CD3VillusBaseLP 67.94 per 1000um squared
CD3VillusTip 37.64 per 1000um squared
CD3VillusTipEP 26.14 per 1000um squared
CD3VillusTipLP 61.34 per 1000um squared
Crypt depth 142.5 um
Epithelial area 45.62 per 1000um squared
Mixed goblet cell density 13.7 per 100um
Mixed goblet cell number 52.43 None
Total goblet cell density 20.9 per 100um
Total goblet cell number 79.98 None
Villus height 382.7 um
Villus height: crypt depth ratio 2.69 um/um
Villus width 119.2 um

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment histology None
Organism Chicken None
Project HoloFood None
Sample code CB02.09A3a None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905530