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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905529, a HoloFood histological chicken sample
Metadata for sample SAMEA112905529, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 0.5 | per 100um |
| Acidic goblet cell number | 2.21 | None |
| CD3VillusBase | 51.54 | per 1000um squared |
| CD3VillusBaseEP | 35.18 | per 1000um squared |
| CD3VillusBaseLP | 81.04 | per 1000um squared |
| CD3VillusTip | 34.12 | per 1000um squared |
| CD3VillusTipEP | 28.75 | per 1000um squared |
| CD3VillusTipLP | 50.88 | per 1000um squared |
| CD3crypt | 17.94 | per 1000um squared |
| CD3cryptEP | 27.34 | per 1000um squared |
| CD3cryptLP | 8.54 | per 1000um squared |
| Crypt depth | 112.7 | um |
| Epithelial area | 60.54 | per 1000um squared |
| Mixed goblet cell density | 15.5 | per 100um |
| Mixed goblet cell number | 68.65 | None |
| Total goblet cell density | 16 | per 100um |
| Total goblet cell number | 70.86 | None |
| Villus height | 442.9 | um |
| Villus height: crypt depth ratio | 3.93 | um/um |
| Villus width | 136.7 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CB01.09A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CE | None |
| Treatment name | Prebiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CB | None |
| Trial description | Trial 2 | None |
| Trial end | 2019-05-19 | None |
| Trial start | 2019-04-21 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905529
