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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905483, a HoloFood histological chicken sample
Metadata for sample SAMEA112905483, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 1.83 | per 100um |
| Acidic goblet cell number | 5.56 | None |
| CD3VillusBase | 42.71 | per 1000um squared |
| CD3VillusBaseEP | 42.21 | per 1000um squared |
| CD3VillusBaseLP | 43.84 | per 1000um squared |
| CD3VillusTip | 45.24 | per 1000um squared |
| CD3VillusTipEP | 39.39 | per 1000um squared |
| CD3VillusTipLP | 58.41 | per 1000um squared |
| CD3crypt | 23.87 | per 1000um squared |
| CD3cryptEP | 31.75 | per 1000um squared |
| CD3cryptLP | 16 | per 1000um squared |
| Crypt depth | 83.7 | um |
| Epithelial area | 39.02 | per 1000um squared |
| Mixed goblet cell density | 24 | per 100um |
| Mixed goblet cell number | 72.77 | None |
| Total goblet cell density | 25.83 | per 100um |
| Total goblet cell number | 78.33 | None |
| Villus height | 303.2 | um |
| Villus height: crypt depth ratio | 3.62 | um/um |
| Villus width | 128.7 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA03.14A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905483
