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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905473, a HoloFood histological chicken sample
Metadata for sample SAMEA112905473, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 3.9 | per 100um |
| Acidic goblet cell number | 17.09 | None |
| CD3VillusBase | 62.62 | per 1000um squared |
| CD3VillusBaseEP | 56.41 | per 1000um squared |
| CD3VillusBaseLP | 79.7 | per 1000um squared |
| CD3VillusTip | 65.96 | per 1000um squared |
| CD3VillusTipEP | 47.62 | per 1000um squared |
| CD3VillusTipLP | 94.67 | per 1000um squared |
| CD3crypt | 17.72 | per 1000um squared |
| CD3cryptEP | 17.1 | per 1000um squared |
| CD3cryptLP | 18.33 | per 1000um squared |
| Crypt depth | 81.44 | um |
| Epithelial area | 35.84 | per 1000um squared |
| Mixed goblet cell density | 23.4 | per 100um |
| Mixed goblet cell number | 102.54 | None |
| Total goblet cell density | 27.3 | per 100um |
| Total goblet cell number | 119.63 | None |
| Villus height | 438.2 | um |
| Villus height: crypt depth ratio | 5.38 | um/um |
| Villus width | 81.78 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA02.11A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905473
