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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905462, a HoloFood histological chicken sample
Metadata for sample SAMEA112905462, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 1.2 | per 100um |
| Acidic goblet cell number | 2.78 | None |
| CD3VillusBase | 67.45 | per 1000um squared |
| CD3VillusBaseEP | 54.84 | per 1000um squared |
| CD3VillusBaseLP | 91.64 | per 1000um squared |
| CD3VillusTip | 42.8 | per 1000um squared |
| CD3VillusTipEP | 28.94 | per 1000um squared |
| CD3VillusTipLP | 79.98 | per 1000um squared |
| CD3crypt | 22.36 | per 1000um squared |
| CD3cryptEP | 16 | per 1000um squared |
| CD3cryptLP | 28.71 | per 1000um squared |
| Crypt depth | 99.3 | um |
| Epithelial area | 28.06 | per 1000um squared |
| Mixed goblet cell density | 23.9 | per 100um |
| Mixed goblet cell number | 55.28 | None |
| Total goblet cell density | 25.1 | per 100um |
| Total goblet cell number | 58.06 | None |
| Villus height | 231.3 | um |
| Villus height: crypt depth ratio | 2.33 | um/um |
| Villus width | 121.3 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA09.08A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CE | None |
| Treatment name | Prebiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905462
