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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905460, a HoloFood histological chicken sample
Metadata for sample SAMEA112905460, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 0.7 | per 100um |
| Acidic goblet cell number | 3.24 | None |
| CD3VillusBase | 66.54 | per 1000um squared |
| CD3VillusBaseEP | 59.69 | per 1000um squared |
| CD3VillusBaseLP | 77.39 | per 1000um squared |
| CD3VillusTip | 44.42 | per 1000um squared |
| CD3VillusTipEP | 39.83 | per 1000um squared |
| CD3VillusTipLP | 55.94 | per 1000um squared |
| CD3crypt | 13.22 | per 1000um squared |
| CD3cryptEP | 12.52 | per 1000um squared |
| CD3cryptLP | 13.92 | per 1000um squared |
| Crypt depth | 115.7 | um |
| Epithelial area | 45.67 | per 1000um squared |
| Mixed goblet cell density | 23.2 | per 100um |
| Mixed goblet cell number | 107.46 | None |
| Total goblet cell density | 23.9 | per 100um |
| Total goblet cell number | 110.7 | None |
| Villus height | 463.2 | um |
| Villus height: crypt depth ratio | 4 | um/um |
| Villus width | 98.6 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA07.09A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CE | None |
| Treatment name | Prebiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905460
