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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905456, a HoloFood histological chicken sample
Metadata for sample SAMEA112905456, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 0.9 | per 100um |
| Acidic goblet cell number | 3.9 | None |
| CD3VillusBase | 37.8 | per 1000um squared |
| CD3VillusBaseEP | 35.23 | per 1000um squared |
| CD3VillusBaseLP | 46.88 | per 1000um squared |
| CD3VillusTip | 33.76 | per 1000um squared |
| CD3VillusTipEP | 30.67 | per 1000um squared |
| CD3VillusTipLP | 43.61 | per 1000um squared |
| CD3crypt | 21.59 | per 1000um squared |
| CD3cryptEP | 15.17 | per 1000um squared |
| CD3cryptLP | 28.01 | per 1000um squared |
| Crypt depth | 122.33 | um |
| Epithelial area | 47.59 | per 1000um squared |
| Mixed goblet cell density | 28.6 | per 100um |
| Mixed goblet cell number | 123.93 | None |
| Total goblet cell density | 29.5 | per 100um |
| Total goblet cell number | 127.83 | None |
| Villus height | 433.3 | um |
| Villus height: crypt depth ratio | 3.54 | um/um |
| Villus width | 109.83 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA24.05A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CE | None |
| Treatment name | Prebiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905456
