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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905448, a HoloFood histological chicken sample
Metadata for sample SAMEA112905448, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 1.7 | per 100um |
| Acidic goblet cell number | 5.96 | None |
| CD3VillusBase | 10.69 | per 1000um squared |
| CD3VillusBaseEP | -1.14 | per 1000um squared |
| CD3VillusBaseLP | 34.61 | per 1000um squared |
| CD3VillusTip | 10.62 | per 1000um squared |
| CD3VillusTipEP | 6.56 | per 1000um squared |
| CD3VillusTipLP | 27.85 | per 1000um squared |
| CD3crypt | 14.08 | per 1000um squared |
| CD3cryptEP | 15.85 | per 1000um squared |
| CD3cryptLP | 12.3 | per 1000um squared |
| Crypt depth | 105.11 | um |
| Epithelial area | 43.39 | per 1000um squared |
| Mixed goblet cell density | 24.4 | per 100um |
| Mixed goblet cell number | 85.54 | None |
| Total goblet cell density | 26.1 | per 100um |
| Total goblet cell number | 91.5 | None |
| Villus height | 350.6 | um |
| Villus height: crypt depth ratio | 3.34 | um/um |
| Villus width | 123.78 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA17.03A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905448
