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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905438, a HoloFood histological chicken sample
Metadata for sample SAMEA112905438, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 1.29 | per 100um |
| Acidic goblet cell number | 4.08 | None |
| CD3VillusBase | 31.36 | per 1000um squared |
| CD3VillusBaseEP | 28.41 | per 1000um squared |
| CD3VillusBaseLP | 41.67 | per 1000um squared |
| CD3VillusTip | 18.84 | per 1000um squared |
| CD3VillusTipEP | 15.23 | per 1000um squared |
| CD3VillusTipLP | 32.38 | per 1000um squared |
| CD3crypt | 19.62 | per 1000um squared |
| CD3cryptEP | 21.21 | per 1000um squared |
| CD3cryptLP | 18.03 | per 1000um squared |
| Crypt depth | 103.3 | um |
| Epithelial area | 32.05 | per 1000um squared |
| Mixed goblet cell density | 23 | per 100um |
| Mixed goblet cell number | 72.91 | None |
| Total goblet cell density | 24.29 | per 100um |
| Total goblet cell number | 76.99 | None |
| Villus height | 317 | um |
| Villus height: crypt depth ratio | 3.07 | um/um |
| Villus width | 101.1 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA06.02A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905438
